STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33703.1Peptidoglycan glycosyltransferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2. (580 aa)    
Predicted Functional Partners:
AGZ33702.1
COG3116 Cell division protein.
 
 0.999
AGZ33708.1
COG0772 Bacterial cell division membrane protein.
 
 0.999
AGZ33712.1
COG1589 Cell division septal protein.
 
 0.999
AGZ33713.1
COG0849 Actin-like ATPase involved in cell division.
 
 0.996
AGZ33543.1
Penicillin-binding protein 1B; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.994
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; COG0769 UDP-N-acetylmuramyl tripeptide synthase.
  
 0.991
AGZ36657.1
COG2919 Septum formation initiator.
 
 0.989
AGZ33139.1
Penicillin-binding protein 1A; COG5009 Membrane carboxypeptidase/penicillin-binding protein.
 
 
 0.983
murC
COG0773 UDP-N-acetylmuramate-alanine ligase.
 
 
 0.981
AGZ33714.1
COG0206 Cell division GTPase.
 
  
 0.980
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.