STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33714.1COG0206 Cell division GTPase. (398 aa)    
Predicted Functional Partners:
AGZ33713.1
COG0849 Actin-like ATPase involved in cell division.
 0.999
zipA
COG3115 Cell division protein.
  
 0.995
AGZ33708.1
COG0772 Bacterial cell division membrane protein.
 
 0.990
AGZ33712.1
COG1589 Cell division septal protein.
  
 
 0.988
AGZ33703.1
Peptidoglycan glycosyltransferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
  
 0.980
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
 
 
 0.979
AGZ33702.1
COG3116 Cell division protein.
    
 0.975
AGZ35771.1
Cell division protein FtsK; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 0.946
AGZ33113.1
Cell division ATP-binding protein FtsE; COG2884 Predicted ATPase involved in cell division.
  
 
 0.941
murC
COG0773 UDP-N-acetylmuramate-alanine ligase.
 
 
 0.930
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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