STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33818.1COG0659 Sulfate permease and related transporters (MFS superfamily). (569 aa)    
Predicted Functional Partners:
AGZ35949.1
Hypothetical protein.
    
 0.775
AGZ33689.1
Cytochrome b/b6 domain-containing protein; COG1290 Cytochrome b subunit of the bc complex.
    
 0.761
AGZ35915.1
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
 0.755
AGZ34312.1
COG0420 DNA repair exonuclease.
  
  0.745
AGZ33819.1
(R)-3-hydroxydecanoyl-ACP:CoA transacylase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
   
  0.597
AGZ34048.1
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 
 0.541
AGZ33817.1
Hypothetical protein.
       0.470
AGZ33612.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 0.464
AGZ35556.1
Alpha/beta hydrolase fold family protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
  0.453
AGZ36498.1
Oxidoreductase FAD/NAD; COG3182 Uncharacterized iron-regulated membrane protein.
  
 
 0.449
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.