STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ34050.1Nitrite reductase, (NAD(P)H) small subunit; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. (120 aa)    
Predicted Functional Partners:
AGZ34049.1
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase.
 0.999
AGZ34334.1
COG2223 Nitrate/nitrite transporter.
  
 
 0.922
AGZ33196.1
COG0174 Glutamine synthetase.
     
 0.904
AGZ34511.1
COG0174 Glutamine synthetase.
     
 0.904
AGZ35001.1
COG0174 Glutamine synthetase.
     
 0.904
AGZ35216.1
Glutamate--putrescine ligase; COG0174 Glutamine synthetase.
     
 0.904
AGZ36269.1
Glutamate--putrescine ligase; COG0174 Glutamine synthetase.
     
 0.904
AGZ36402.1
Glutamate--putrescine ligase; COG0174 Glutamine synthetase.
     
 0.904
AGZ37700.1
COG0174 Glutamine synthetase.
     
 0.904
AGZ37701.1
COG0174 Glutamine synthetase.
     
 0.904
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.