STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ34401.1Two component heavy metal response transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (226 aa)    
Predicted Functional Partners:
AGZ34400.1
COG0642 Signal transduction histidine kinase.
 
 0.986
AGZ32828.1
COG0642 Signal transduction histidine kinase.
 
 0.943
AGZ32853.1
COG0642 Signal transduction histidine kinase.
 
 0.943
AGZ37001.1
COG0642 Signal transduction histidine kinase.
 
  0.936
AGZ34880.1
COG0642 Signal transduction histidine kinase.
 
 0.783
AGZ33832.1
COG0642 Signal transduction histidine kinase.
 
 0.726
AGZ34037.1
Integral membrane sensor hybrid histidine kinase; COG0591 Na+/proline symporter.
  
 
 0.695
AGZ35515.1
Hpt sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 
 0.688
AGZ36318.1
COG0642 Signal transduction histidine kinase.
 
 
 0.677
AGZ33999.1
COG0642 Signal transduction histidine kinase.
  
 
 0.674
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.