STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGZ34407.1Response regulator receiver modulated serine phosphatase; COG0784 FOG: CheY-like receiver. (393 aa)    
Predicted Functional Partners:
AGZ34408.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
 
 
 0.995
AGZ33999.1
COG0642 Signal transduction histidine kinase.
 
  
 0.896
AGZ35515.1
Hpt sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  
 0.849
AGZ34406.1
Type IV pilus assembly PilZ.
 
   
 0.836
AGZ36215.1
COG2198 FOG: HPt domain.
 
  
 0.777
flgJ
Flagellar rod assembly protein/muramidase FlgJ; COG3951 Rod binding protein.
   
    0.776
AGZ36217.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
 
 
 0.766
AGZ32841.1
Hypothetical protein.
  
 
 0.762
AGZ32930.1
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
  
     0.761
AGZ37045.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.