STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ34414.1Formate dehydrogenase subunit gamma; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit. (160 aa)    
Predicted Functional Partners:
AGZ34415.1
NADH dehydrogenase (quinone); COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
 0.999
AGZ34416.1
Formate dehydrogenase subunit alpha; COG3383 Uncharacterized anaerobic dehydrogenase.
 
 0.999
AGZ34417.1
Formate dehydrogenase subunit delta.
 
 
 0.999
AGZ35906.1
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
  
 0.999
AGZ35908.1
NADH dehydrogenase I subunit F; COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
 0.989
AGZ35909.1
COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G).
 
 0.977
AGZ35905.1
COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases.
 
 0.973
AGZ37328.1
Formate dehydrogenase subunit alpha; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 0.970
AGZ35910.1
COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H).
  
 0.969
AGZ35912.1
COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J).
 
 0.969
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.