STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ34435.1PAS/PAC sensor-containing methyl-accepting chemotaxis sensory transducer; COG2202 FOG: PAS/PAC domain. (521 aa)    
Predicted Functional Partners:
AGZ35686.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 0.993
AGZ36978.1
COG0835 Chemotaxis signal transduction protein.
 
 0.992
AGZ36199.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.991
AGZ36193.1
COG0835 Chemotaxis signal transduction protein.
 
 0.990
AGZ36262.1
Response regulator receiver modulated CheW protein; COG0835 Chemotaxis signal transduction protein.
 
 0.990
AGZ36261.1
CheR-type MCP methyltransferase; COG1352 Methylase of chemotaxis methyl-accepting proteins.
 
 0.989
AGZ34372.1
Response regulator receiver modulated CheW protein; COG0835 Chemotaxis signal transduction protein.
 
 0.985
AGZ36198.1
Chemotaxis-specific protein-glutamate methyltransferase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 0.983
AGZ36720.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.979
AGZ35826.1
CheB methylesterase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 0.976
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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