STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ34604.1Phage regulatory protein; COG4197 Uncharacterized protein conserved in bacteria, prophage-related. (69 aa)    
Predicted Functional Partners:
AGZ34603.1
COG2932 Predicted transcriptional regulator.
  
  
 0.612
AGZ34605.1
Hypothetical protein.
       0.484
AGZ34607.1
COG0305 Replicative DNA helicase.
     
 0.431
AGZ34609.1
Hypothetical protein.
       0.421
AGZ34606.1
Phage replication protein.
       0.409
AGZ34608.1
Hypothetical protein.
       0.409
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.