Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGZ34767.1COG0296 1,4-alpha-glucan branching enzyme. (736 aa)    
Predicted Functional Partners:
AGZ34788.1
Glycogen debranching protein GlgX; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases.
 
 
 0.999
glgA
COG0297 Glycogen synthase.
 
 0.999
AGZ33200.1
COG0058 Glucan phosphorylase.
 
 0.997
AGZ34766.1
Trehalose synthase; COG0366 Glycosidases.
 
 
 0.997
AGZ34791.1
COG1640 4-alpha-glucanotransferase.
 
 0.997
AGZ34765.1
Alpha amylase; COG0366 Glycosidases.
 
 
 0.996
AGZ35560.1
COG0033 Phosphoglucomutase.
  
 0.920
AGZ34790.1
COG3280 Maltooligosyl trehalose synthase.
 
  
 0.887
atpD
COG0055 F0F1-type ATP synthase, beta subunit.
   
 0.671
AGZ34792.1
Malto-oligosyltrehalose trehalohydrolase; COG0296 1,4-alpha-glucan branching enzyme.
 
  
0.615
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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