STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ35073.1Polar amino acid ABC transporter inner membrane subunit; COG4160 ABC-type arginine/histidine transport system, permease component. (236 aa)    
Predicted Functional Partners:
AGZ35074.1
Polar amino acid ABC transporter inner membrane subunit; COG4215 ABC-type arginine transport system, permease component.
 
 
0.995
AGZ37665.1
Cystine transporter subunit; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.975
AGZ35071.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.938
AGZ35075.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.921
AGZ36294.1
Polar amino acid ABC transporter inner membrane subunit; COG4215 ABC-type arginine transport system, permease component.
 
 
0.882
AGZ33222.1
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.881
AGZ37554.1
ABC transporter-like protein; COG4598 ABC-type histidine transport system, ATPase component.
 
 0.868
AGZ36292.1
Basic amino acid ABC transporter, ATP-binding pr; COG4598 ABC-type histidine transport system, ATPase component.
 
 0.866
AGZ37867.1
Arginine/ornithine ABC transporter, ATP-binding protein AotP; COG4598 ABC-type histidine transport system, ATPase component.
 
 0.866
AGZ37555.1
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.862
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.