Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGZ33322.1 | AGZ35223.1 | PVLB_02565 | PVLB_12175 | COG1519 3-deoxy-D-manno-octulosonic-acid transferase. | Hypothetical protein. | 0.901 |
AGZ33322.1 | AGZ37058.1 | PVLB_02565 | PVLB_21395 | COG1519 3-deoxy-D-manno-octulosonic-acid transferase. | Hypothetical protein. | 0.901 |
AGZ33322.1 | lpxK | PVLB_02565 | PVLB_07105 | COG1519 3-deoxy-D-manno-octulosonic-acid transferase. | COG1663 Tetraacyldisaccharide-1-P 4'-kinase. | 0.997 |
AGZ33934.1 | AGZ34347.1 | PVLB_05635 | PVLB_07735 | 17 kDa surface antigen; COG3133 Outer membrane lipoprotein. | COG5393 Predicted membrane protein. | 0.480 |
AGZ33934.1 | AGZ35223.1 | PVLB_05635 | PVLB_12175 | 17 kDa surface antigen; COG3133 Outer membrane lipoprotein. | Hypothetical protein. | 0.663 |
AGZ33934.1 | AGZ36669.1 | PVLB_05635 | PVLB_19440 | 17 kDa surface antigen; COG3133 Outer membrane lipoprotein. | COG2825 Outer membrane protein. | 0.471 |
AGZ33934.1 | AGZ37058.1 | PVLB_05635 | PVLB_21395 | 17 kDa surface antigen; COG3133 Outer membrane lipoprotein. | Hypothetical protein. | 0.658 |
AGZ33934.1 | AGZ37416.1 | PVLB_05635 | PVLB_23185 | 17 kDa surface antigen; COG3133 Outer membrane lipoprotein. | LPS-assembly protein lptD; COG1452 Organic solvent tolerance protein OstA. | 0.417 |
AGZ34008.1 | AGZ34331.1 | PVLB_06005 | PVLB_07655 | Hypothetical protein. | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.518 |
AGZ34008.1 | AGZ35223.1 | PVLB_06005 | PVLB_12175 | Hypothetical protein. | Hypothetical protein. | 0.610 |
AGZ34008.1 | AGZ36017.1 | PVLB_06005 | PVLB_16170 | Hypothetical protein. | Hypothetical protein. | 0.836 |
AGZ34008.1 | AGZ37058.1 | PVLB_06005 | PVLB_21395 | Hypothetical protein. | Hypothetical protein. | 0.620 |
AGZ34008.1 | AGZ37416.1 | PVLB_06005 | PVLB_23185 | Hypothetical protein. | LPS-assembly protein lptD; COG1452 Organic solvent tolerance protein OstA. | 0.503 |
AGZ34331.1 | AGZ34008.1 | PVLB_07655 | PVLB_06005 | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.518 |
AGZ34331.1 | AGZ35223.1 | PVLB_07655 | PVLB_12175 | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.910 |
AGZ34331.1 | AGZ36017.1 | PVLB_07655 | PVLB_16170 | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.494 |
AGZ34331.1 | AGZ36669.1 | PVLB_07655 | PVLB_19440 | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | COG2825 Outer membrane protein. | 0.704 |
AGZ34331.1 | AGZ37058.1 | PVLB_07655 | PVLB_21395 | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.911 |
AGZ34331.1 | AGZ37416.1 | PVLB_07655 | PVLB_23185 | OmpF family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | LPS-assembly protein lptD; COG1452 Organic solvent tolerance protein OstA. | 0.722 |
AGZ34347.1 | AGZ33934.1 | PVLB_07735 | PVLB_05635 | COG5393 Predicted membrane protein. | 17 kDa surface antigen; COG3133 Outer membrane lipoprotein. | 0.480 |
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