STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ35225.1COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (296 aa)    
Predicted Functional Partners:
AGZ33314.1
COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
     0.601
AGZ33267.1
Hypothetical protein.
  
    0.549
AGZ35183.1
Bacteriophage N4 receptor, outer membrane subunit; COG0457 FOG: TPR repeat.
  
  
 0.545
AGZ33458.1
Hypothetical protein.
  
     0.515
AGZ32964.1
COG2823 Predicted periplasmic or secreted lipoprotein.
  
     0.511
AGZ35557.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
    0.507
AGZ32859.1
COG0583 Transcriptional regulator.
  
     0.506
AGZ34859.1
GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.497
AGZ35730.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
    0.496
AGZ33649.1
Carbohydrate-binding and sugar hydrolysis protein.
  
     0.489
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.