STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ35383.1Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins. (935 aa)    
Predicted Functional Partners:
AGZ37330.1
Short-chain dehydrogenase/reductase SDR; COG4221 Short-chain alcohol dehydrogenase of unknown specificity.
 
  
 0.702
AGZ35852.1
MbtH domain protein; COG3251 Uncharacterized protein conserved in bacteria.
 
  
 0.676
AGZ33391.1
Short-chain dehydrogenase/reductase SDR; COG4221 Short-chain alcohol dehydrogenase of unknown specificity.
 
  
 0.665
AGZ35851.1
Thioesterase; COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
  
 0.660
rplF
COG0097 Ribosomal protein L6P/L9E.
    
 0.629
AGZ33016.1
ATPase domain-containing protein; COG0515 Serine/threonine protein kinase.
 
   
 0.623
AGZ36073.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 
0.617
AGZ36074.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 
0.617
AGZ36072.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 
0.615
AGZ34237.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
    
 0.574
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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