Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGZ35396.1 | AGZ35469.1 | PVLB_13050 | PVLB_13415 | COG0169 Shikimate 5-dehydrogenase. | COG0757 3-dehydroquinate dehydratase II. | 0.923 |
AGZ35396.1 | AGZ35470.1 | PVLB_13050 | PVLB_13420 | COG0169 Shikimate 5-dehydrogenase. | COG0169 Shikimate 5-dehydrogenase. | 0.927 |
AGZ35396.1 | AGZ35543.1 | PVLB_13050 | PVLB_13785 | COG0169 Shikimate 5-dehydrogenase. | Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase. | 0.900 |
AGZ35396.1 | AGZ35708.1 | PVLB_13050 | PVLB_14620 | COG0169 Shikimate 5-dehydrogenase. | COG0757 3-dehydroquinate dehydratase II. | 0.922 |
AGZ35396.1 | AGZ35709.1 | PVLB_13050 | PVLB_14625 | COG0169 Shikimate 5-dehydrogenase. | COG0169 Shikimate 5-dehydrogenase. | 0.925 |
AGZ35396.1 | AGZ35835.1 | PVLB_13050 | PVLB_15255 | COG0169 Shikimate 5-dehydrogenase. | COG0169 Shikimate 5-dehydrogenase. | 0.927 |
AGZ35396.1 | AGZ37223.1 | PVLB_13050 | PVLB_22220 | COG0169 Shikimate 5-dehydrogenase. | COG0757 3-dehydroquinate dehydratase II. | 0.912 |
AGZ35396.1 | AGZ37442.1 | PVLB_13050 | PVLB_23315 | COG0169 Shikimate 5-dehydrogenase. | COG4993 Glucose dehydrogenase. | 0.900 |
AGZ35396.1 | aroE | PVLB_13050 | PVLB_00465 | COG0169 Shikimate 5-dehydrogenase. | COG0169 Shikimate 5-dehydrogenase. | 0.928 |
AGZ35396.1 | aroK | PVLB_13050 | PVLB_01675 | COG0169 Shikimate 5-dehydrogenase. | COG0703 Shikimate kinase. | 0.954 |
AGZ35469.1 | AGZ35396.1 | PVLB_13415 | PVLB_13050 | COG0757 3-dehydroquinate dehydratase II. | COG0169 Shikimate 5-dehydrogenase. | 0.923 |
AGZ35469.1 | AGZ35470.1 | PVLB_13415 | PVLB_13420 | COG0757 3-dehydroquinate dehydratase II. | COG0169 Shikimate 5-dehydrogenase. | 0.983 |
AGZ35469.1 | AGZ35543.1 | PVLB_13415 | PVLB_13785 | COG0757 3-dehydroquinate dehydratase II. | Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase. | 0.900 |
AGZ35469.1 | AGZ35708.1 | PVLB_13415 | PVLB_14620 | COG0757 3-dehydroquinate dehydratase II. | COG0757 3-dehydroquinate dehydratase II. | 0.906 |
AGZ35469.1 | AGZ35709.1 | PVLB_13415 | PVLB_14625 | COG0757 3-dehydroquinate dehydratase II. | COG0169 Shikimate 5-dehydrogenase. | 0.914 |
AGZ35469.1 | AGZ35835.1 | PVLB_13415 | PVLB_15255 | COG0757 3-dehydroquinate dehydratase II. | COG0169 Shikimate 5-dehydrogenase. | 0.912 |
AGZ35469.1 | AGZ37223.1 | PVLB_13415 | PVLB_22220 | COG0757 3-dehydroquinate dehydratase II. | COG0757 3-dehydroquinate dehydratase II. | 0.906 |
AGZ35469.1 | AGZ37442.1 | PVLB_13415 | PVLB_23315 | COG0757 3-dehydroquinate dehydratase II. | COG4993 Glucose dehydrogenase. | 0.900 |
AGZ35469.1 | aroE | PVLB_13415 | PVLB_00465 | COG0757 3-dehydroquinate dehydratase II. | COG0169 Shikimate 5-dehydrogenase. | 0.927 |
AGZ35469.1 | aroK | PVLB_13415 | PVLB_01675 | COG0757 3-dehydroquinate dehydratase II. | COG0703 Shikimate kinase. | 0.460 |
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