STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ36512.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
AGZ36513.1
Hypothetical protein.
       0.773
AGZ36511.1
Hypothetical protein.
       0.639
AGZ36515.1
Hypothetical protein.
       0.594
AGZ36514.1
Tail fiber assembly domain protein.
       0.593
AGZ36518.1
COG4733 Phage-related protein, tail component.
       0.574
AGZ36516.1
Hypothetical protein.
       0.565
AGZ36517.1
Hypothetical protein; COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog).
       0.565
AGZ36519.1
COG4723 Phage-related protein, tail component.
       0.565
AGZ36520.1
Lipoprotein.
       0.450
AGZ36510.1
Hypothetical protein; COG1088 dTDP-D-glucose 4,6-dehydratase.
       0.404
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.