STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ36626.1Hypothetical protein; COG0392 Predicted integral membrane protein. (880 aa)    
Predicted Functional Partners:
AGZ36627.1
Hypothetical protein; COG3946 Type IV secretory pathway, VirJ component.
 
   
 0.959
AGZ32957.1
DNAse I-like hydrolase; COG3568 Metal-dependent hydrolase.
 
  
 0.596
AGZ37492.1
COG0225 Peptide methionine sulfoxide reductase.
     
 0.578
AGZ33506.1
COG0294 Dihydropteroate synthase and related enzymes.
     
 0.573
AGZ33400.1
Hypothetical protein.
 
   
 0.563
AGZ36653.1
S-formylglutathione hydrolase; COG0627 Predicted esterase.
     
 0.553
AGZ35686.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.545
AGZ35688.1
Hypothetical protein; COG3568 Metal-dependent hydrolase.
  
  
 0.541
AGZ33568.1
CDP-alcohol phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase.
 
  
 0.539
AGZ34199.1
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
     
 0.531
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.