STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AGZ36723.1CheW protein; COG0835 Chemotaxis signal transduction protein. (168 aa)    
Predicted Functional Partners:
AGZ36720.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.999
AGZ36721.1
CheW protein; COG0835 Chemotaxis signal transduction protein.
 
  
 0.998
AGZ36724.1
COG0840 Methyl-accepting chemotaxis protein.
 
 0.998
AGZ36719.1
Chemotaxis-specific methylesterase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 
 0.997
AGZ36718.1
Response regulator/GGDEF domain-containing protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.994
AGZ36722.1
CheR-type MCP methyltransferase; COG1352 Methylase of chemotaxis methyl-accepting proteins.
 
 
 0.987
AGZ36199.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.966
AGZ33257.1
Sensor histidine kinase/response regulator ChpA; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.955
AGZ35686.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 0.917
AGZ36198.1
Chemotaxis-specific protein-glutamate methyltransferase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
  
 0.856
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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