STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ36730.1COG1012 NAD-dependent aldehyde dehydrogenases. (474 aa)    
Predicted Functional Partners:
AGZ33061.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
 
 0.919
AGZ37286.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
 
 0.919
AGZ35896.1
Class III aminotransferase; COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
 
 0.918
AGZ36346.1
Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family.
  
 0.916
AGZ37446.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; COG0388 Predicted amidohydrolase.
   
 0.909
AGZ34513.1
Aminotransferase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
 
 
 0.903
AGZ37699.1
Aminotransferase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
 
 
 0.903
AGZ34909.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 
0.902
AGZ34904.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 
0.901
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; COG0506 Proline dehydrogenase.
 
0.870
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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