STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGZ36802.1Two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (241 aa)    
Predicted Functional Partners:
AGZ36801.1
COG0642 Signal transduction histidine kinase.
 
 
 0.966
AGZ35756.1
COG0642 Signal transduction histidine kinase.
 
 
 0.829
AGZ35722.1
COG0642 Signal transduction histidine kinase.
 
 
 0.822
AGZ35342.1
COG0642 Signal transduction histidine kinase.
 
 
 0.807
AGZ37623.1
COG0642 Signal transduction histidine kinase.
 
   0.805
AGZ35546.1
COG0642 Signal transduction histidine kinase.
 
 
 0.785
AGZ34001.1
COG0642 Signal transduction histidine kinase.
 
 
 0.767
AGZ32853.1
COG0642 Signal transduction histidine kinase.
 
 
 0.766
AGZ37818.1
COG0642 Signal transduction histidine kinase.
 
 0.765
AGZ33736.1
COG0642 Signal transduction histidine kinase.
 
 
 0.762
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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