STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGZ37786.1Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase. (403 aa)    
Predicted Functional Partners:
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; COG0756 dUTPase.
 
 
 0.987
coaD
COG0669 Phosphopantetheine adenylyltransferase.
 
 
 0.965
AGZ37382.1
Pantothenate kinase; COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor.
 
  
 0.940
panC
Pantoate--beta-alanine ligase; COG0414 Panthothenate synthetase.
 
  
 0.918
mazG
Nucleoside triphosphate pyrophosphohydrolase; COG1694 Predicted pyrophosphatase.
  
  
  0.915
coaE
COG0237 Dephospho-CoA kinase.
 
 
 0.911
AGZ33757.1
COG3124 Uncharacterized protein conserved in bacteria.
     
  0.900
AGZ36472.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
 
  0.828
AGZ36446.1
COG0031 Cysteine synthase.
    
 0.813
AGZ37254.1
Aromatic acid decarboxylase; COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase.
    
  0.785
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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