STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; COG0756 dUTPase. (151 aa)    
Predicted Functional Partners:
AGZ37786.1
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase.
 
  
 0.973
thyA
COG0207 Thymidylate synthase.
  
 0.971
ndk
Multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase; COG0105 Nucleoside diphosphate kinase.
   
 
 0.942
dcd
COG0717 Deoxycytidine deaminase.
    
 0.929
surE
5'(3')-nucleotidase/polyphosphatase; COG0496 Predicted acid phosphatase.
 
  
 0.920
AGZ37633.1
COG1011 Predicted hydrolase (HAD superfamily).
    
  0.901
AGZ35871.1
5'-nucleotidase.
     
  0.900
AGZ32812.1
COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).
  
  
 0.869
AGZ33975.1
COG0209 Ribonucleotide reductase, alpha subunit.
  
  
 0.866
AGZ32952.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 
 0.665
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (14%) [HD]