STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ37864.1COG2230 Cyclopropane fatty acid synthase and related methyltransferases. (394 aa)    
Predicted Functional Partners:
AGZ35630.1
Amine oxidase; COG2907 Predicted NAD/FAD-binding protein.
  
 0.968
AGZ35631.1
Hypothetical protein.
  
 0.759
AGZ37054.1
Hypothetical protein.
 
   
 0.594
AGZ37865.1
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
     
 0.491
AGZ33721.1
ATP--cobalamin adenosyltransferase.
  
    0.461
AGZ36230.1
COG1334 Uncharacterized flagellar protein FlaG.
   
   0.407
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.