Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g76006USP domain-containing protein; Belongs to the peptidase C19 family. (121 aa)    
Predicted Functional Partners:
CBR_g40851
Uncharacterized protein.
    
 
 0.843
CBR_g74692
Ubiquitin-like domain-containing protein.
    
 0.820
CBR_g763
Ubiquitin-like domain-containing protein.
    
 0.820
CBR_g51339
Ubiquitin-like domain-containing protein.
    
 0.820
CBR_g17872
Uncharacterized protein.
    
 0.803
CBR_g17869
Uncharacterized protein.
    
 0.803
CBR_g72634
Ubiquitin-like domain-containing protein.
    
 0.802
CBR_g12084
Ubiquitin-like domain-containing protein.
    
 0.802
CBR_g50650
Ubiquitin-like domain-containing protein.
    
 0.802
CBR_g38987
Ubiquitin-like domain-containing protein.
    
 0.794
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (16%) [HD]