STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g38493Uncharacterized protein. (1383 aa)    
Predicted Functional Partners:
CBR_g6624
RRM domain-containing protein.
    
 0.904
CBR_g36287
Smg4_UPF3 domain-containing protein.
   
 0.891
CBR_g19808
Uncharacterized protein.
   
 0.868
CBR_g39626
Helicase ATP-binding domain-containing protein.
   
 0.867
CBR_g8052
Helicase ATP-binding domain-containing protein.
   
 0.867
CBR_g53494
DRBM domain-containing protein.
   
 0.858
CBR_g45710
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.848
CBR_g45714
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.848
CBR_g4062
Nuclear cap-binding protein subunit 2.
   
 0.834
CBR_g4015
MIF4G domain-containing protein.
     
 0.764
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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