STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8569Uncharacterized protein. (660 aa)    
Predicted Functional Partners:
CBR_g16978
RNase_PH domain-containing protein.
  
 0.997
CBR_g31491
RNase_PH domain-containing protein.
  
0.997
CBR_g61059
KH_dom_type_1 domain-containing protein.
   
 0.997
CBR_g8579
Uncharacterized protein.
   
 0.996
CBR_g20981
Uncharacterized protein.
  
0.995
CBR_g41407
RNase_PH domain-containing protein.
  
 0.995
CBR_g31324
Uncharacterized protein.
   
 0.991
CBR_g31328
KH_dom_type_1 domain-containing protein.
   
 0.991
CBR_g39322
HRDC domain-containing protein.
   
 0.984
CBR_g11026
Tr-type G domain-containing protein.
   
 0.984
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.