Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8635HATPase_c domain-containing protein. (728 aa)    
Predicted Functional Partners:
CBR_g30800
Uncharacterized protein.
   
 0.994
CBR_g32001
Uncharacterized protein.
   
 0.979
CBR_g51500
Uncharacterized protein.
   
 0.978
CBR_g9124
CS domain-containing protein.
   
 0.962
CBR_g50831
Uncharacterized protein.
  
 0.928
CBR_g30835
Reverse transcriptase domain-containing protein; Belongs to the chaperonin (HSP60) family.
   
 0.923
CBR_g16801
Uncharacterized protein.
   
 0.922
CBR_g18730
Uncharacterized protein.
   
 
 0.917
CBR_g34543
HATPase_c domain-containing protein.
   
 0.912
CBR_g8922
Uncharacterized protein; Belongs to the chaperonin (HSP60) family.
   
 0.900
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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