Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8602Uncharacterized protein. (607 aa)    
Predicted Functional Partners:
CBR_g44528
ERCC4 domain-containing protein.
    
 0.587
CBR_g38906
DNA polymerase.
    
 0.551
CBR_g9031
Uncharacterized protein.
    
  0.532
CBR_g52457
Uncharacterized protein; Belongs to the complex I LYR family.
   
  0.527
CBR_g13053
Integrase catalytic domain-containing protein.
    
  0.523
CBR_g17713
Integrase catalytic domain-containing protein.
    
  0.523
CBR_g26249
CCHC-type domain-containing protein.
    
  0.523
CBR_g29565
Integrase_H2C2 domain-containing protein.
    
  0.523
CBR_g41394
Uncharacterized protein.
    
  0.523
CBR_g12802
NmrA domain-containing protein.
    
  0.522
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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