Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8616Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (559 aa)    
Predicted Functional Partners:
CBR_g29440
Uncharacterized protein.
     
 0.910
CBR_g29503
Alpha_adaptinC2 domain-containing protein.
    
 0.861
CBR_g50283
Uncharacterized protein.
     
  0.800
CBR_g37139
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.780
CBR_g8983
Uncharacterized protein.
    
 0.776
CBR_g5751
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.768
CBR_g31057
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.768
CBR_g46784
Uncharacterized protein.
    
 0.768
CBR_g46777
Clathrin-link domain-containing protein.
    
 0.768
CBR_g46780
Uncharacterized protein.
    
 0.768
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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