Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8654Epimerase domain-containing protein. (313 aa)    
Predicted Functional Partners:
CBR_g50778
NAD(P)-bd_dom domain-containing protein.
 
 0.983
CBR_g54109
NAD(P)-bd_dom domain-containing protein.
 
 0.983
CBR_g42133
Uncharacterized protein.
  
 
 0.916
CBR_g19791
NTP_transferase domain-containing protein.
  
 0.837
CBR_g51471
DHFR domain-containing protein.
   
 0.824
CBR_g35037
Epimerase domain-containing protein.
  
 
 0.821
CBR_g4803
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.817
CBR_g26483
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.811
CBR_g422
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.798
CBR_g21828
Uncharacterized protein.
   
  0.794
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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