Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8614Uncharacterized protein. (637 aa)    
Predicted Functional Partners:
CBR_g32001
Uncharacterized protein.
   
 0.839
CBR_g34543
HATPase_c domain-containing protein.
    
 0.821
CBR_g9124
CS domain-containing protein.
    
 0.807
CBR_g8635
HATPase_c domain-containing protein.
    
 0.719
CBR_g57858
HATPase_c domain-containing protein.
    
 0.719
CBR_g10827
Uncharacterized protein.
    
 0.719
CBR_g23606
HATPase_c domain-containing protein.
    
 0.719
CBR_g39427
Uncharacterized protein.
    
 0.719
CBR_g30800
Uncharacterized protein.
    
 0.700
CBR_g20224
Uncharacterized protein.
  
 
   0.498
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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