STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8650RING-type domain-containing protein. (855 aa)    
Predicted Functional Partners:
CBR_g45403
PRKCSH domain-containing protein.
   
 0.968
CBR_g50024
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.902
CBR_g40139
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.861
CBR_g48427
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.858
CBR_g7957
Ubiquitin-like domain-containing protein.
   
 0.824
CBR_g54903
AAA domain-containing protein.
    
 0.810
CBR_g46749
AAA domain-containing protein.
    
 0.810
CBR_g8453
Uncharacterized protein.
    
 0.810
CBR_g19546
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.799
CBR_g4009
Uncharacterized protein.
    
  0.790
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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