STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g11886DDE Tnp4 domain-containing protein. (323 aa)    
Predicted Functional Partners:
CBR_g6457
Uncharacterized protein.
  
     0.508
CBR_g19154
Uncharacterized protein.
  
     0.507
CBR_g41056
Uncharacterized protein.
  
     0.494
CBR_g31447
Uncharacterized protein.
  
     0.492
CBR_g30327
Uncharacterized protein.
  
     0.482
CBR_g37989
Uncharacterized protein.
    
  0.460
CBR_g50199
DDE Tnp4 domain-containing protein.
  
     0.456
CBR_g17830
Uncharacterized protein.
  
     0.438
CBR_g17925
DDE Tnp4 domain-containing protein.
  
     0.438
CBR_g36969
Uncharacterized protein.
  
     0.434
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.