STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g12415RT_RNaseH_2 domain-containing protein. (1367 aa)    
Predicted Functional Partners:
CBR_g24123
PAPS_reduct domain-containing protein.
    
 0.923
CBR_g36815
Uncharacterized protein.
   
 0.911
CBR_g36817
Oxidored_molyb domain-containing protein.
   
 0.911
CBR_g4474
AMP-binding domain-containing protein.
  
 0.802
CBR_g29350
Hydrolase_4 domain-containing protein.
    
 0.778
CBR_g29351
Hydrolase_4 domain-containing protein.
    
 0.778
CBR_g48040
Mre11_DNA_bind domain-containing protein.
    
 0.771
CBR_g44539
AAA_23 domain-containing protein.
    
 0.762
CBR_g4586
Uncharacterized protein.
    
 0.751
CBR_g32242
Hydrolase_4 domain-containing protein.
    
 0.733
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.