Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g12448Uncharacterized protein. (507 aa)    
Predicted Functional Partners:
CBR_g26451
Uncharacterized protein.
   
 0.703
CBR_g6357
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.693
CBR_g32336
Uncharacterized protein.
    
 0.678
CBR_g24242
Mitogen-activated protein kinase.
   
 0.647
CBR_g38100
Protein kinase domain-containing protein.
   
 0.647
CBR_g12050
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.647
CBR_g19012
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.647
CBR_g22947
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.647
CBR_g41515
GAS domain-containing protein.
   
  0.623
CBR_g16035
Uncharacterized protein.
    
 0.607
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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