Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g15996Uncharacterized protein. (1027 aa)    
Predicted Functional Partners:
CBR_g50184
Uncharacterized protein.
     
 0.895
CBR_g48726
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.894
CBR_g4482
Citrate synthase; Belongs to the citrate synthase family.
     
 0.894
CBR_g22263
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.894
CBR_g8483
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.886
CBR_g11008
Citrate synthase; Belongs to the citrate synthase family.
     
 0.875
CBR_g11149
Uncharacterized protein.
     
 0.869
CBR_g26132
Malate synthase; Belongs to the malate synthase family.
     
 0.867
CBR_g12837
Ldh_1_C domain-containing protein.
     
 0.864
CBR_g19456
Uncharacterized protein.
    
 0.845
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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