Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g15984Uncharacterized protein. (852 aa)    
Predicted Functional Partners:
CBR_g4062
Nuclear cap-binding protein subunit 2.
    
 0.627
CBR_g4015
MIF4G domain-containing protein.
    
 0.626
CBR_g18868
Uncharacterized protein.
    
 0.626
CBR_g11173
RRM domain-containing protein.
   
 0.607
CBR_g55163
Uncharacterized protein.
    
 0.605
CBR_g11018
Uncharacterized protein.
    
 0.568
CBR_g21827
Sm domain-containing protein.
    
 0.565
CBR_g29963
PSP domain-containing protein.
    
  0.555
CBR_g34604
RRM domain-containing protein.
    
  0.554
CBR_g18907
Small nuclear ribonucleoprotein G.
    
 0.550
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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