STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g16050Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (424 aa)    
Predicted Functional Partners:
CBR_g66667
ATG13 domain-containing protein.
   
 0.840
CBR_g4474
AMP-binding domain-containing protein.
     
 0.757
CBR_g36926
TPR_REGION domain-containing protein.
    
  0.672
CBR_g3545
TPR_REGION domain-containing protein.
    
  0.672
CBR_g24398
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.616
CBR_g4187
Uncharacterized protein.
    
  0.604
CBR_g3023
Uncharacterized protein.
     
 0.601
CBR_g61481
Uncharacterized protein.
   
  0.598
CBR_g36665
Uncharacterized protein.
    
  0.575
CBR_g36663
Uncharacterized protein.
    
  0.575
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.