STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g20374Uncharacterized protein. (1151 aa)    
Predicted Functional Partners:
CBR_g37523
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.993
CBR_g48777
Uncharacterized protein.
    
 0.985
CBR_g26495
Uncharacterized protein.
    
 0.984
CBR_g3444
Uncharacterized protein.
   
 0.977
CBR_g30206
Uncharacterized protein.
   
 0.977
CBR_g45459
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.971
CBR_g48346
Uncharacterized protein.
    
 0.968
CBR_g29687
Uncharacterized protein.
    
 0.968
CBR_g35046
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.863
CBR_g30127
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.824
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.