STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g21818Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (207 aa)    
Predicted Functional Partners:
CBR_g36815
Uncharacterized protein.
  
 
 0.950
CBR_g36817
Oxidored_molyb domain-containing protein.
  
 
 0.950
CBR_g80527
Uncharacterized protein.
   
 0.946
CBR_g12714
NAD_binding_1 domain-containing protein.
   
 0.946
CBR_g23983
Uncharacterized protein.
  
 0.942
CBR_g50003
Pyr_redox_2 domain-containing protein.
    
 0.896
CBR_g42037
Pyr_redox_2 domain-containing protein.
  
 0.892
CBR_g26339
Uncharacterized protein.
    
 
 0.888
CBR_g17684
Uncharacterized protein.
   
 
 0.875
CBR_g24155
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.861
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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