STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g26132Malate synthase; Belongs to the malate synthase family. (574 aa)    
Predicted Functional Partners:
CBR_g8290
Isocitrate lyase.
 
 
 0.998
CBR_g4482
Citrate synthase; Belongs to the citrate synthase family.
  
 0.967
CBR_g11008
Citrate synthase; Belongs to the citrate synthase family.
  
 0.967
CBR_g19595
Glycolate oxidase (GOX)-like protein.
  
 
 0.956
CBR_g19652
Uncharacterized protein.
   
 0.933
CBR_g57869
Uncharacterized protein.
   
 0.928
CBR_g776
Reverse transcriptase domain-containing protein.
   
 0.922
CBR_g41061
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.922
CBR_g3058
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
 0.920
CBR_g49204
Hydroxypyruvate reductase 1 (HPR).
  
 
 0.918
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.