STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g48659Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
CBR_g48119
Uncharacterized protein.
  
  
  0.683
CBR_g41515
GAS domain-containing protein.
  
 
 
 0.676
CBR_g48122
Uncharacterized protein.
  
  
 0.674
CBR_g29814
Uncharacterized protein.
  
 
   0.616
CBR_g19645
Uncharacterized protein.
    
 
 0.579
CBR_g48121
NYD-SP28 domain-containing protein.
  
  
  0.559
CBR_g17054
Uncharacterized protein.
    
 
 0.553
CBR_g49722
Uncharacterized protein.
   
   0.526
CBR_g48209
Uncharacterized protein.
    
 
 0.522
CBR_g19644
Uncharacterized protein.
    
 
 0.515
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.