STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g50768Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
CBR_g26360
3'-5' exonuclease domain-containing protein.
  
 0.845
CBR_g39230
Uncharacterized protein.
  
 0.845
CBR_g8027
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.792
CBR_g28512
RECA_2 domain-containing protein.
    
 0.757
CBR_g29371
RECA_2 domain-containing protein.
   
 0.755
CBR_g8885
Uncharacterized protein; Belongs to the RecA family.
   
 0.755
CBR_g48040
Mre11_DNA_bind domain-containing protein.
  
 0.731
CBR_g6685
Rad51 domain-containing protein.
   
 0.730
CBR_g44528
ERCC4 domain-containing protein.
   
 0.721
CBR_g44539
AAA_23 domain-containing protein.
  
 0.710
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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