STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g57822Uncharacterized protein. (919 aa)    
Predicted Functional Partners:
CBR_g57824
Uncharacterized protein.
 
     0.951
CBR_g57826
DHC_N2 domain-containing protein.
 
     0.950
CBR_g53503
Uncharacterized protein.
 
     0.949
CBR_g34182
Reverse transcriptase domain-containing protein.
 
     0.948
CBR_g51641
Dynein_AAA_lid domain-containing protein.
 
     0.948
CBR_g34179
Uncharacterized protein.
 
     0.947
CBR_g31001
AAA_lid_1 domain-containing protein.
 
     0.946
CBR_g53520
AAA_8 domain-containing protein.
 
     0.946
CBR_g52377
Uncharacterized protein.
 
     0.945
CBR_g51368
DHC_N2 domain-containing protein.
 
     0.945
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.