CBR_g564 protein (Chara braunii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CBR_g564

ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (139 aa)

Predicted Functional Partners:

CBR_g21060

0.894

CBR_g45374

0.763

CBR_g40116

0.750

CBR_g51409

0.735

CBR_g16936

0.734

CBR_g46712

0.714

CBR_g46675

0.714

CBR_g86671

0.706

CBR_g53762

0.706

CBR_g24113

0.706

Your Current Organism:

Chara braunii

NCBI taxonomy Id: 69332
Other names: C. braunii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBR_g16936	CBR_g21060	A0A388KU49	A0A388L0J7	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.922
CBR_g16936	CBR_g24113	A0A388KU49	A0A388L5T7	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein.	0.780
CBR_g16936	CBR_g40116	A0A388KU49	A0A388LT83	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	RRM domain-containing protein; Belongs to the actin family.	0.858
CBR_g16936	CBR_g45374	A0A388KU49	A0A388LYB1	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein; Belongs to the actin family.	0.871
CBR_g16936	CBR_g46675	A0A388KU49	A0A388M0T1	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein.	0.803
CBR_g16936	CBR_g46712	A0A388KU49	A0A388K3W8	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein; Belongs to the actin family.	0.803
CBR_g16936	CBR_g51409	A0A388KU49	A0A388M8M3	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	WD_REPEATS_REGION domain-containing protein.	0.506
CBR_g16936	CBR_g53762	A0A388KU49	A0A388K775	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein; Belongs to the actin family.	0.780
CBR_g16936	CBR_g564	A0A388KU49	A0A388KBM5	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.734
CBR_g16936	CBR_g86671	A0A388KU49	A0A388JL50	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein; Belongs to the actin family.	0.780
CBR_g21060	CBR_g16936	A0A388L0J7	A0A388KU49	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	0.922
CBR_g21060	CBR_g24113	A0A388L0J7	A0A388L5T7	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein.	0.583
CBR_g21060	CBR_g40116	A0A388L0J7	A0A388LT83	Adenylyl cyclase-associated protein; Belongs to the CAP family.	RRM domain-containing protein; Belongs to the actin family.	0.799
CBR_g21060	CBR_g45374	A0A388L0J7	A0A388LYB1	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein; Belongs to the actin family.	0.804
CBR_g21060	CBR_g46675	A0A388L0J7	A0A388M0T1	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein.	0.578
CBR_g21060	CBR_g46712	A0A388L0J7	A0A388K3W8	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein; Belongs to the actin family.	0.578
CBR_g21060	CBR_g51409	A0A388L0J7	A0A388M8M3	Adenylyl cyclase-associated protein; Belongs to the CAP family.	WD_REPEATS_REGION domain-containing protein.	0.830
CBR_g21060	CBR_g53762	A0A388L0J7	A0A388K775	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein; Belongs to the actin family.	0.583
CBR_g21060	CBR_g564	A0A388L0J7	A0A388KBM5	Adenylyl cyclase-associated protein; Belongs to the CAP family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.894
CBR_g21060	CBR_g86671	A0A388L0J7	A0A388JL50	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein; Belongs to the actin family.	0.583