STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g961Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
CBR_g23782
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.973
CBR_g433
Peptidase_M48 domain-containing protein.
    
 0.929
CBR_g12691
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.917
CBR_g46210
Uncharacterized protein.
   
 0.917
CBR_g21757
Uncharacterized protein.
     
 0.902
CBR_g12422
Abhydrolase_3 domain-containing protein.
     
 0.867
CBR_g7977
Uncharacterized protein.
     
 0.755
CBR_g28660
Transferrin-like domain-containing protein.
     
 0.755
CBR_g11181
Uncharacterized protein.
    
 0.728
CBR_g42040
Uncharacterized protein.
    
 0.728
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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