STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g978Uncharacterized protein. (764 aa)    
Predicted Functional Partners:
CBR_g41534
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
    
 0.957
CBR_g23797
MRP-S28 domain-containing protein.
    
 0.953
CBR_g40648
Uncharacterized protein.
   
 0.946
CBR_g50476
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.916
CBR_g21235
Uncharacterized protein.
    
 
 0.896
CBR_g38598
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.888
CBR_g3821
Uncharacterized protein.
     
  0.858
CBR_g24146
Uncharacterized protein.
     
  0.858
CBR_g50891
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
     
  0.858
CBR_g18728
Uncharacterized protein.
   
 
 0.854
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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