STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g3117F-box domain-containing protein; Belongs to the actin family. (714 aa)    
Predicted Functional Partners:
CBR_g57845
Uncharacterized protein.
    
 0.970
CBR_g23159
HSA domain-containing protein.
    
 0.905
CBR_g23157
Uncharacterized protein.
    
 0.905
CBR_g32029
Uncharacterized protein; Belongs to the actin family.
    
 0.819
CBR_g48690
Uncharacterized protein.
    
 0.808
CBR_g18699
WD_REPEATS_REGION domain-containing protein.
   
 0.799
CBR_g46712
Uncharacterized protein; Belongs to the actin family.
  
 
0.797
CBR_g61459
Uncharacterized protein.
   
 0.793
CBR_g9158
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.786
CBR_g4477
Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.
   
 0.785
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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