STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g3852zf-RVT domain-containing protein. (708 aa)    
Predicted Functional Partners:
CBR_g3656
Uncharacterized protein.
   
   0.651
CBR_g38475
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.620
CBR_g74630
Uncharacterized protein.
    
 0.620
CBR_g57845
Uncharacterized protein.
    
  0.613
CBR_g38138
Ribosomal_L2_C domain-containing protein.
   
 
 0.602
CBR_g49988
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.598
CBR_g6395
Uncharacterized protein.
    
  0.595
CBR_g55230
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
  0.558
CBR_g88534
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.545
CBR_g2974
Uncharacterized protein.
   
   0.545
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.