STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g4353CBF domain-containing protein. (1327 aa)    
Predicted Functional Partners:
CBR_g20280
Uncharacterized protein.
   
 
 0.917
CBR_g22381
Uncharacterized protein.
   
 
 0.873
CBR_g29474
Uncharacterized protein.
   
 
 0.846
CBR_g22358
Uncharacterized protein.
   
 
 0.845
CBR_g30814
Uncharacterized protein.
   
 
 0.841
CBR_g32692
Uncharacterized protein.
   
 
 0.832
CBR_g38896
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.825
CBR_g227
Brix domain-containing protein.
   
   0.803
CBR_g11154
RRM domain-containing protein.
   
 
 0.797
CBR_g19000
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.793
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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